| 100% | YERBA | 5 | San Francisco Bay's ___ Buena Island |
| 73% | YERBA | 5 | ___ Buena Island in San Francisco Bay |
| 73% | YERBA | 5 | San Francisco's ___ Buena Island |
| 65% | YERBA | 5 | ___ Buena (island in San Francisco Bay) |
| 64% | ALAMEDA | 7 | Island in San Francisco Bay |
| 64% | ALCATRAZ | 8 | Island in San Francisco Bay |
| 61% | AREA | 4 | San Francisco Bay ___, Berkeley's region |
| 60% | ALCATRAZ | 8 | Penal island in San Francisco Bay |
| 60% | ALCATRAZ | 8 | Captivating island in San Francisco Bay |
| 58% | ALCATRAZ | 8 | Island in San Francisco Bay that housed a federal prison until 1963 |
| 56% | AREA | 4 | San Francisco Bay ___ |
| 56% | ALAMEDA | 7 | San Francisco Bay city |
| 56% | FREMONT | 7 | San Francisco Bay city |
| 56% | PALOALTO | 8 | San Francisco Bay city |
| 56% | GOLDENGATE | 10 | San Francisco Bay entrance |
| 56% | ALCATRAZ | 8 | San Francisco Bay attraction |
| 55% | FOG | 3 | San Francisco Bay weather phenomenon |
| 55% | AREA | 4 | San Francisco Bay ___ (California region) |
| 55% | RIA | 3 | San Francisco Bay, to geologists |
| 53% | GATE | 4 | San Francisco Bay has a "golden" one |
| 53% | PALOALTO | 8 | City on San Francisco Bay |
| 53% | SAUSALITO | 9 | Town on San Francisco Bay |
| 53% | ALCATRAZ | 8 | Notorious San Francisco Bay prison |
| 53% | ALAMEDA | 7 | City on San Francisco Bay |
| 53% | MARIN | 5 | County on San Francisco Bay |
| 53% | GOLDENGATE | 10 | Entrance to San Francisco Bay |
| 52% | ALCATRAZ | 8 | Former penitentiary in San Francisco Bay |
| 51% | GAYMECCA | 8 | San Francisco or Fire Island |
| 50% | ALTO | 4 | Palo ___, city in the San Francisco Bay Area |
| 50% | PALO | 4 | With 5-Across, city on San Francisco Bay |